graphkit-learn
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graphkit-learn
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C
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D
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E
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F
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G
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H
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I
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K
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L
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M
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N
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P
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R
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S
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T
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U
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W
C
check_json_serializable() (in module gklearn.utils.utils)
chi2_kernel() (in module gklearn.utils.kernels)
commonwalkkernel() (in module gklearn.kernels.commonWalkKernel)
compute_distance_matrix() (in module gklearn.utils.utils)
compute_gram_matrices() (in module gklearn.utils.model_selection_precomputed)
compute_gram_matrices_by_class() (in module gklearn.utils.utils)
compute_kernel_matrix() (in module gklearn.kernels.weisfeilerLehmanKernel)
compute_subtree_kernel() (in module gklearn.kernels.weisfeilerLehmanKernel)
compute_vertex_kernels() (in module gklearn.utils.utils)
computeVK() (in module gklearn.kernels.randomWalkKernel)
computeW() (in module gklearn.kernels.randomWalkKernel)
cosine_kernel() (in module gklearn.utils.kernels)
D
deleteWord() (Trie method)
delta_kernel() (in module gklearn.utils.kernels)
deltakernel() (in module gklearn.utils.kernels)
direct_product() (in module gklearn.utils.utils)
direct_product_graph() (in module gklearn.utils.utils)
DUMMY (SpecialLabel attribute)
dummy_edge() (in module gklearn.utils.utils)
dummy_node() (in module gklearn.utils.utils)
E
exponential_kernel() (in module gklearn.utils.kernels)
F
filterGramMatrix() (in module gklearn.kernels.randomWalkKernel)
find_all_path_as_trie() (in module gklearn.kernels.untilHPathKernel)
find_all_paths() (in module gklearn.kernels.treeletKernel)
(in module gklearn.utils.utils)
find_all_paths_until_length() (in module gklearn.kernels.untilHPathKernel)
find_all_walks() (in module gklearn.kernels.commonWalkKernel)
find_all_walks_until_length() (in module gklearn.kernels.commonWalkKernel)
find_paths() (in module gklearn.kernels.treeletKernel)
(in module gklearn.utils.utils)
find_walks() (in module gklearn.kernels.commonWalkKernel)
floydTransformation() (in module gklearn.utils.utils)
func_fp() (in module gklearn.kernels.randomWalkKernel)
G
gaussian_kernel() (in module gklearn.utils.kernels)
gaussiankernel() (in module gklearn.utils.kernels)
get_canonkeys() (in module gklearn.kernels.treeletKernel)
get_dataset_attributes() (in module gklearn.utils.graphdataset)
get_edge_labels() (in module gklearn.utils.utils)
get_graph_kernel_by_name() (in module gklearn.utils.utils)
get_mlti_dim_edge_attrs() (in module gklearn.utils.utils)
get_mlti_dim_node_attrs() (in module gklearn.utils.utils)
get_node_labels() (in module gklearn.utils.utils)
get_shortest_paths() (in module gklearn.kernels.structuralspKernel)
(in module gklearn.utils.utils)
get_sp_graph() (in module gklearn.utils.utils)
get_sps_as_trie() (in module gklearn.kernels.structuralspKernel)
getAllEdgeKernels() (in module gklearn.kernels.structuralspKernel)
getAllNodeKernels() (in module gklearn.kernels.structuralspKernel)
getLabels() (in module gklearn.kernels.randomWalkKernel)
getNode() (Trie method)
getSPGraph() (in module gklearn.utils.utils)
getSPLengths() (in module gklearn.utils.utils)
gklearn
module
gklearn.kernels
module
gklearn.kernels.commonWalkKernel
module
gklearn.kernels.marginalizedKernel
module
gklearn.kernels.randomWalkKernel
module
gklearn.kernels.spKernel
module
gklearn.kernels.structuralspKernel
module
gklearn.kernels.treeletKernel
module
gklearn.kernels.untilHPathKernel
module
gklearn.kernels.weisfeilerLehmanKernel
module
gklearn.utils
module
gklearn.utils.graphdataset
module
gklearn.utils.graphfiles
module
gklearn.utils.kernels
module
gklearn.utils.model_selection_precomputed
module
gklearn.utils.parallel
module
gklearn.utils.trie
module
gklearn.utils.utils
module
graph_deepcopy() (in module gklearn.utils.utils)
graph_isIdentical() (in module gklearn.utils.utils)
H
highest_polynomial_kernel() (in module gklearn.utils.kernels)
I
insertWord() (Trie method)
intersection_kernel() (in module gklearn.utils.kernels)
inverse_multiquadratic_kernel() (in module gklearn.utils.kernels)
is_basic_python_type() (in module gklearn.utils.utils)
K
kernelproduct() (in module gklearn.utils.kernels)
kernelsum() (in module gklearn.utils.kernels)
kronecker_delta_kernel() (in module gklearn.utils.kernels)
L
laplacian_kernel() (in module gklearn.utils.kernels)
linear_kernel() (in module gklearn.utils.kernels)
linearkernel() (in module gklearn.utils.kernels)
load_from_json() (Trie method)
load_from_pickle() (Trie method)
load_predefined_dataset() (in module gklearn.utils.graphdataset)
loadCT() (in module gklearn.utils.graphfiles)
loadDataset() (in module gklearn.utils.graphfiles)
loadFromDS() (in module gklearn.utils.graphfiles)
loadFromXML() (in module gklearn.utils.graphfiles)
loadGXL() (in module gklearn.utils.graphfiles)
loadMAT() (in module gklearn.utils.graphfiles)
loadSDF() (in module gklearn.utils.graphfiles)
loadTXT() (in module gklearn.utils.graphfiles)
M
marginalizedkernel() (in module gklearn.kernels.marginalizedKernel)
model_selection_for_precomputed_kernel() (in module gklearn.utils.model_selection_precomputed)
module
gklearn
gklearn.kernels
gklearn.kernels.commonWalkKernel
gklearn.kernels.marginalizedKernel
gklearn.kernels.randomWalkKernel
gklearn.kernels.spKernel
gklearn.kernels.structuralspKernel
gklearn.kernels.treeletKernel
gklearn.kernels.untilHPathKernel
gklearn.kernels.weisfeilerLehmanKernel
gklearn.utils
gklearn.utils.graphdataset
gklearn.utils.graphfiles
gklearn.utils.kernels
gklearn.utils.model_selection_precomputed
gklearn.utils.parallel
gklearn.utils.trie
gklearn.utils.utils
multiquadratic_kernel() (in module gklearn.utils.kernels)
N
normalize_gram_matrix() (in module gklearn.utils.utils)
nx_permute_nodes() (in module gklearn.utils.utils)
P
parallel_ged_mat() (in module gklearn.utils.parallel)
parallel_gm() (in module gklearn.utils.parallel)
parallel_me() (in module gklearn.utils.parallel)
parallel_trial_do() (in module gklearn.utils.model_selection_precomputed)
paths2labelseqs() (in module gklearn.kernels.untilHPathKernel)
polynomial_kernel() (in module gklearn.utils.kernels)
polynomialkernel() (in module gklearn.utils.kernels)
printResultsInTable() (in module gklearn.utils.model_selection_precomputed)
R
randomwalkkernel() (in module gklearn.kernels.randomWalkKernel)
read_gram_matrices_from_file() (in module gklearn.utils.model_selection_precomputed)
S
save_to_json() (Trie method)
save_to_pickle() (Trie method)
saveDataset() (in module gklearn.utils.graphfiles)
saveGXL() (in module gklearn.utils.graphfiles)
searchWord() (Trie method)
searchWordPrefix() (Trie method)
sigmoid_kernel() (in module gklearn.utils.kernels)
SpecialLabel (class in gklearn.utils.utils)
spkernel() (in module gklearn.kernels.spKernel)
spkernel_do() (in module gklearn.kernels.spKernel)
ssp_do_trie() (in module gklearn.kernels.structuralspKernel)
structuralspkernel() (in module gklearn.kernels.structuralspKernel)
structuralspkernel_do() (in module gklearn.kernels.structuralspKernel)
T
tanimoto_kernel() (in module gklearn.utils.kernels)
to_json() (Trie method)
traverseBothTriee() (in module gklearn.kernels.structuralspKernel)
traverseBothTriem() (in module gklearn.kernels.structuralspKernel)
traverseBothTrieu() (in module gklearn.kernels.structuralspKernel)
traverseBothTriev() (in module gklearn.kernels.structuralspKernel)
traverseTrie2e() (in module gklearn.kernels.structuralspKernel)
traverseTrie2m() (in module gklearn.kernels.structuralspKernel)
traverseTrie2u() (in module gklearn.kernels.structuralspKernel)
traverseTrie2v() (in module gklearn.kernels.structuralspKernel)
treeletkernel() (in module gklearn.kernels.treeletKernel)
trial_do() (in module gklearn.utils.model_selection_precomputed)
Trie (class in gklearn.utils.trie)
U
undefined_node() (in module gklearn.utils.utils)
untilhpathkernel() (in module gklearn.kernels.untilHPathKernel)
untotterTransformation() (in module gklearn.utils.utils)
W
weisfeilerlehmankernel() (in module gklearn.kernels.weisfeilerLehmanKernel)
wl_iteration() (in module gklearn.kernels.weisfeilerLehmanKernel)
wrapper_cg_labeled_do() (in module gklearn.kernels.randomWalkKernel)
wrapper_cg_unlabled_do() (in module gklearn.kernels.randomWalkKernel)
wrapper_compute_subtree_kernel() (in module gklearn.kernels.weisfeilerLehmanKernel)
wrapper_cw_exp() (in module gklearn.kernels.commonWalkKernel)
wrapper_cw_geo() (in module gklearn.kernels.commonWalkKernel)
wrapper_find_all_path_as_trie() (in module gklearn.kernels.untilHPathKernel)
wrapper_find_all_paths_until_length() (in module gklearn.kernels.untilHPathKernel)
wrapper_fp_labeled_do() (in module gklearn.kernels.randomWalkKernel)
wrapper_get_canonkeys() (in module gklearn.kernels.treeletKernel)
wrapper_getSP_naive() (in module gklearn.kernels.structuralspKernel)
wrapper_getSP_trie() (in module gklearn.kernels.structuralspKernel)
wrapper_getSPGraph() (in module gklearn.kernels.spKernel)
wrapper_marg_do() (in module gklearn.kernels.marginalizedKernel)
wrapper_sd_do() (in module gklearn.kernels.randomWalkKernel)
wrapper_se_do() (in module gklearn.kernels.randomWalkKernel)
wrapper_sp_do() (in module gklearn.kernels.spKernel)
wrapper_ssp_do() (in module gklearn.kernels.structuralspKernel)
wrapper_ssp_do_trie() (in module gklearn.kernels.structuralspKernel)
wrapper_treeletkernel_do() (in module gklearn.kernels.treeletKernel)
wrapper_uhpath_do_kernelless() (in module gklearn.kernels.untilHPathKernel)
wrapper_uhpath_do_naive() (in module gklearn.kernels.untilHPathKernel)
wrapper_uhpath_do_trie() (in module gklearn.kernels.untilHPathKernel)
wrapper_untotter() (in module gklearn.kernels.marginalizedKernel)
wrapper_wl_iteration() (in module gklearn.kernels.weisfeilerLehmanKernel)
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